STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rab40cRab40C, member RAS oncogene family. (287 aa)    
Predicted Functional Partners:
Mthfsd
Methenyltetrahydrofolate synthetase domain containing.
   
    0.785
Chm
Choroidermia (RAB escort protein 1).
    
 0.780
Wdr6
WD repeat domain 6.
   
    0.775
ENSJJAP00000010602
annotation not available
   
    0.769
Rabggtb
Rab geranylgeranyl transferase, b subunit.
    
 0.759
Rilpl2
Rab interacting lysosomal protein-like 2.
    
 
 0.753
Cul5
Cullin 5.
    
 
 0.736
Exoc4
Exocyst complex component 4.
    
 0.732
Exoc7
Exocyst complex component 7.
   
 0.713
Gm7271
Predicted gene 7271.
    
 0.703
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.