STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam20cFamily with sequence similarity 20, member C. (506 aa)    
Predicted Functional Partners:
Fam20a
Family with sequence similarity 20, member A.
  
 
0.995
Fam20b
Family with sequence similarity 20, member B.
    
0.949
Spp1
Secreted phosphoprotein 1.
    
 0.801
Suox
Sulfite oxidase.
     
 0.776
Ambn
Ameloblastin.
    
 0.771
Fga
Fibrinogen alpha chain.
    
  0.770
Penk
Preproenkephalin.
    
 0.741
Sacm1l
SAC1 suppressor of actin mutations 1-like (yeast).
    
 0.740
Sgk3
Serum/glucocorticoid regulated kinase 3.
    
 0.733
Pdia6
Protein disulfide isomerase associated 6.
    
 0.729
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.