STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snx27Sorting nexin family member 27. (539 aa)    
Predicted Functional Partners:
ENSJJAP00000006550
annotation not available
   
 
 0.979
Otulin
OTU deubiquitinase with linear linkage specificity.
    
 
 0.978
ENSJJAP00000017221
annotation not available
   
 
 0.952
Vps26b
VPS26 retromer complex component B.
   
 
 0.898
Vps35
VPS35 retromer complex component.
    
 
 0.744
Phlpp1
PH domain and leucine rich repeat protein phosphatase 1.
    
   0.714
Dgkz
Diacylglycerol kinase zeta.
    
 
 0.699
Tbc1d5
TBC1 domain family, member 5.
    
 
 0.652
Snx1
Sorting nexin 1.
    
 
 0.651
Snx2
Sorting nexin 2.
    
 
 0.651
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.