STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nup54Nucleoporin 54. (509 aa)    
Predicted Functional Partners:
Ranbp2
RAN binding protein 2.
   
 0.999
Nup205
Nucleoporin 205.
   
 0.998
Nup93
Nucleoporin 93.
   
 0.998
Nup85
Nucleoporin 85.
   
 0.997
ENSJJAP00000007343
annotation not available
   
 0.997
ENSJJAP00000013890
annotation not available
   
 0.997
Nup98
Nucleoporin 98.
   
 0.997
Nup155
Nucleoporin 155.
   
 0.997
Nup133
Nucleoporin 133.
   
 0.997
Nup62
Nucleoporin 62.
   
 0.996
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.