STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Utp25UTP25 small subunit processome component. (767 aa)    
Predicted Functional Partners:
Utp3
UTP3 small subunit processome component.
   
 0.999
Nol6
Nucleolar protein family 6 (RNA-associated).
   
 0.999
Nop14
NOP14 nucleolar protein.
   
 0.997
Rrp36
Ribosomal RNA processing 36 homolog (S. cerevisiae).
   
 0.997
ENSJJAP00000024159
annotation not available
   
 0.997
ENSJJAP00000005728
annotation not available
   
  0.996
Pdcd11
Programmed cell death 11.
   
 
 0.994
Mphosph10
M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein).
   
 
 0.993
Wdr46
WD repeat domain 46.
   
 
  0.992
Abt1
Activator of basal transcription 1.
   
 
 0.988
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.