STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pkd1l2Polycystic kidney disease 1 like 2. (2462 aa)    
Predicted Functional Partners:
Pkd2l1
Polycystic kidney disease 2-like 1.
    
0.989
Pkd1l3
Polycystic kidney disease 1 like 3.
  
 
0.986
Pkd2
Polycystin 2, transient receptor potential cation channel.
    
0.946
Pkd2l2
Polycystic kidney disease 2-like 2.
    
0.901
Myot
Myotilin.
    
 0.866
Exoc5
Exocyst complex component 5.
     
 0.589
Pkd1
Polycystin 1, transient receptor poteintial channel interacting.
    
0.587
Pkdrej
Polycystin (PKD) family receptor for egg jelly.
    
0.583
ENSJJAP00000013668
annotation not available
    
 0.580
ENSJJAP00000019559
annotation not available
    
 0.580
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.