STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hps3HPS3, biogenesis of lysosomal organelles complex 2 subunit 1. (912 aa)    
Predicted Functional Partners:
Hps6
HPS6, biogenesis of lysosomal organelles complex 2 subunit 3.
   
 
 0.767
ENSJJAP00000009607
annotation not available
   
 
 0.637
ENSJJAP00000018410
annotation not available
   
 
 0.637
Bloc1s3
Biogenesis of lysosomal organelles complex-1, subunit 3.
      
 0.570
Hps1
HPS1, biogenesis of lysosomal organelles complex 3 subunit 1.
      
 0.570
Hps4
HPS4, biogenesis of lysosomal organelles complex 3 subunit 2.
      
 0.570
Bloc1s5
Biogenesis of lysosomal organelles complex-1, subunit 5, muted.
      
 0.570
Dtnbp1
Dystrobrevin binding protein 1.
      
 0.569
Tecpr2
Tectonin beta-propeller repeat containing 2.
   
 
 0.568
Ap3b1
Adaptor-related protein complex 3, beta 1 subunit.
      
 0.550
Your Current Organism:
Jaculus jaculus
NCBI taxonomy Id: 51337
Other names: J. jaculus, lesser Egyptian jerboa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.