STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ptpdc1Protein tyrosine phosphatase domain-containing protein 1 isoform X1. (746 aa)    
Predicted Functional Partners:
Klk9
Kallikrein 9.
      
 0.659
Setd2
[histone H3]-dimethyl-L-lysine36 N-methyltransferase.
    
 
 0.564
Wls
Protein wntless homolog isoform X1.
    
 0.564
Gper1
G-protein coupled estrogen receptor 1.
      
 0.561
Kif20b
Kinesin-like protein KIF20B.
   
  
 0.554
Ippk
Inositol-pentakisphosphate 2-kinase isoform X1.
      
 0.541
ENSCCNP00000010977
annotation not available
    
  0.539
ENSCCNP00000019524
Intersectin-2-like isoform X1.
    
  0.539
Itsn2
Intersectin 2.
    
  0.539
Ppp2r2a
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1.
    
  0.500
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.