STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Capn6Calpain-6. (641 aa)    
Predicted Functional Partners:
Capns1
LOW QUALITY PROTEIN: calpain small subunit 1.
 
 
 0.922
Cwh43
PGAP2-interacting protein.
      
 0.669
Maob
Monoamine oxidase B.
   
  
 0.630
Abcc4
ATP-binding cassette, subfamily C (CFTR/MRP), member 4.
    
 
 0.561
ENSCCNP00000010977
annotation not available
   
 
  0.515
ENSCCNP00000019524
Intersectin-2-like isoform X1.
   
 
  0.515
Itsn2
Intersectin 2.
   
 
  0.515
ENSCCNP00000002824
LOW QUALITY PROTEIN: calpastatin-like.
   
 0.514
ENSCCNP00000033135
Calpastatin-like.
   
 0.514
ENSCCNP00000013845
annotation not available
   
 
 0.500
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.