STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000000304Mitochondrial-processing peptidase subunit beta-like. (141 aa)    
Predicted Functional Partners:
ENSCCNP00000029239
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 0.989
ENSCCNP00000009227
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
   
 0.976
Uqcrc2
Cytochrome b-c1 complex subunit 2, mitochondrial.
  
 0.972
Cox5a
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.965
Uqcr10
Ubiquinol-cytochrome c reductase subunit 9.
   
 0.962
Ndufa9
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial.
   
 0.956
ENSCCNP00000030211
Ubiquinol-cytochrome c reductase subunit 8.
   
 0.955
Ndufv1
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial.
   
 0.954
Ndufs3
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial.
   
 0.942
Ndufs8
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial isoform X1.
  
 
 0.937
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.