STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snu13U4/U6 small nuclear ribonucleoprotein SNU13. (128 aa)    
Predicted Functional Partners:
Nop56
Nucleolar protein 56.
   
 0.999
Nop58
Nucleolar protein 58 isoform X1.
   
 0.999
Utp15
U3 small nucleolar RNA-associated protein 15 homolog.
   
 0.998
Prpf31
LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp31.
    
 0.996
Rrp9
U3 small nucleolar RNA-interacting protein 2.
   
 0.996
Utp4
U3 small nucleolar RNA-associated protein 4 homolog.
   
 0.995
Prpf3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.
   
 0.993
Sart1
U4/U6.U5 tri-snRNP-associated protein 1 isoform X1.
   
 0.992
Wdr43
U3 small nucleolar RNA-associated protein 5.
   
 0.988
Utp18
U3 small nucleolar RNA-associated protein 18 homolog.
   
 0.988
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.