STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sh2d4aSH2 domain containing 4A. (422 aa)    
Predicted Functional Partners:
Ppp1cb
Serine/threonine-protein phosphatase PP1-beta catalytic subunit.
    
 
 0.639
Scml2
Sex comb on midleg-like protein 2.
      
 0.572
Ccdc15
LOW QUALITY PROTEIN: coiled-coil domain-containing protein 15.
      
 0.563
Mthfsd
Methenyltetrahydrofolate synthetase domain containing.
      
 0.518
Ifi30
Gamma-interferon-inducible lysosomal thiol reductase isoform X1.
      
 0.477
Ablim3
LOW QUALITY PROTEIN: actin-binding LIM protein 3.
      
 0.459
Spatc1
Spermatogenesis and centriole associated 1.
      
 0.456
Ppp1r7
Protein phosphatase 1 regulatory subunit 7 isoform X1.
    
 
 0.437
Csmd2
CUB and sushi domain-containing protein 2.
      
 0.403
ENSCCNP00000008220
CUB and sushi domain-containing protein 1.
      
 0.403
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.