STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trmt10cMitochondrial ribonuclease P protein 1. (418 aa)    
Predicted Functional Partners:
Hsd17b10
3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase.
    
 0.976
ENSCCNP00000008246
Mitochondrial ribonuclease P protein 3-like isoform X1.
   
 0.910
ENSCCNP00000008367
Mitochondrial ribonuclease P protein 3-like.
   
 0.910
Rpf1
Ribosome production factor 1 isoform X1.
   
  
 0.851
Trmt6
TRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X1.
   
 
 0.801
Trmt61a
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
   
 0.774
Trmt61b
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
   
 
 0.731
Mettl1
TRNA (guanine-N(7)-)-methyltransferase isoform X1.
   
 
 0.645
Elac2
Zinc phosphodiesterase ELAC protein 2 isoform X1.
   
 
 0.639
Wdr4
TRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform X1.
   
 
 0.623
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.