STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FtcdGlutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase. (541 aa)    
Predicted Functional Partners:
Mthfs
5-formyltetrahydrofolate cyclo-ligase.
    
 0.989
Mthfd1
LOW QUALITY PROTEIN: C-1-tetrahydrofolate synthase, cytoplasmic.
    
 0.988
Mthfd2l
Methylenetetrahydrofolate dehydrogenase(NAD+) / 5,10-methenyltetrahydrofolate cyclohydrolase.
    
 0.988
Mthfd2
Methylenetetrahydrofolate dehydrogenase(NAD+) / 5,10-methenyltetrahydrofolate cyclohydrolase.
    
 0.988
Mthfd1l
LOW QUALITY PROTEIN: monofunctional C1-tetrahydrofolate synthase, mitochondrial.
    
 0.988
Amdhd1
Probable imidazolonepropionase.
  
 
 0.973
Mtfmt
LOW QUALITY PROTEIN: methionyl-tRNA formyltransferase, mitochondrial.
    
 0.952
Shmt2
LOW QUALITY PROTEIN: serine hydroxymethyltransferase, mitochondrial.
  
 
 0.938
Shmt1
Serine hydroxymethyltransferase, cytosolic.
  
 
 0.938
Amt
Aminomethyltransferase, mitochondrial.
  
 
 0.935
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.