STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kdelr3ER lumen protein-retaining receptor 3 isoform X1. (224 aa)    
Predicted Functional Partners:
Copb1
Coatomer subunit beta.
   
 0.680
Tmed10
LOW QUALITY PROTEIN: transmembrane emp24 domain-containing protein 10.
   
 0.679
Arcn1
Coatomer subunit delta.
   
 
 0.650
Surf4
Surfeit locus protein 4 isoform X1.
   
 0.640
Copb2
Coatomer subunit beta' isoform X1.
   
 
 0.630
Ykt6
Synaptobrevin homolog YKT6.
   
 
 0.616
Tmed2
Transmembrane emp24 domain-containing protein 2 isoform X1.
   
 
 0.610
Nsf
Vesicle-fusing ATPase isoform X1.
   
 
 0.587
Copa
Coatomer subunit alpha.
     
 0.576
Gbf1
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1.
    
 0.570
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.