STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chmp4aCharged multivesicular body protein 4a. (221 aa)    
Predicted Functional Partners:
Chmp7
Charged multivesicular body protein 7.
    
0.967
ENSCCNP00000027899
Programmed cell death 6-interacting protein isoform X1.
   
 0.945
Mlkl
Mixed lineage kinase domain-like protein isoform X1.
    
 0.903
Chmp4c
Charged multivesicular body protein 4c.
  
  
 
0.902
Chmp4b
Charged multivesicular body protein 4b.
  
  
 
0.902
ENSCCNP00000024260
Charged multivesicular body protein 3.
   
 0.838
Chmp5
Charged multivesicular body protein 5.
  
 0.832
Chmp2a
Charged multivesicular body protein 2A.
   
 0.813
Ptpn23
Protein tyrosine phosphatase, non-receptor type 23.
   
 0.813
Vps36
Vacuolar protein-sorting-associated protein 36 isoform X1.
    
 0.799
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.