STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prrc2bProtein PRRC2B isoform X1. (2233 aa)    
Predicted Functional Partners:
G3bp2
Ras GTPase-activating protein-binding protein 2 isoform X1.
   
 
 0.627
Ubap2l
Ubiquitin-associated protein 2-like isoform X1.
   
 
 0.612
Tert
Telomerase reverse transcriptase isoform X1.
      
 0.578
Eif3h
Eukaryotic translation initiation factor 3 subunit H.
    
 
 0.562
Hdac5
Histone deacetylase 5 isoform X1.
    
 
 0.538
Ep400
LOW QUALITY PROTEIN: E1A-binding protein p400.
   
 
 0.529
ENSCCNP00000001922
Eukaryotic translation initiation factor 3 subunit F.
   
   0.518
Eif3l
Eukaryotic translation initiation factor 3 subunit L.
    
   0.483
Caprin1
Caprin-1 isoform X1.
   
 
 0.474
Wdr91
LOW QUALITY PROTEIN: WD repeat-containing protein 91.
      
 0.474
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.