STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000001084Lymphoid enhancer-binding factor 1. (234 aa)    
Predicted Functional Partners:
Ctnnb1
Catenin beta 1.
    
 0.996
Smad4
Mothers against decapentaplegic homolog 4 isoform X1.
    
 0.972
Jup
Junction plakoglobin isoform X1.
    
 0.969
Nlk
Serine/threonine-protein kinase NLK.
    
 0.965
Crebbp
CREB-binding protein isoform X1.
   
 0.959
Ep300
Histone acetyltransferase p300.
   
 0.956
Axin2
Axin 2.
   
 0.954
Sox17
Transcription factor SOX17 (SOX group F).
    
0.951
Ctbp1
C-terminal-binding protein 1 isoform X1.
    
 0.944
Axin1
Axin-1 isoform X1.
   
 0.943
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.