STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000001118annotation not available (328 aa)    
Predicted Functional Partners:
Babam2
BRCA1-A complex subunit BRE.
    
 0.791
ENSCCNP00000017337
BRCA1/BRCA2-containing complex subunit 3.
    
 0.791
Babam1
BRISC and BRCA1 A complex member 1.
    
 0.787
Abraxas1
BRCA1-A complex subunit Abraxas isoform X1.
    
 0.787
Bard1
BRCA1-associated RING domain protein 1 isoform X1.
    
 0.680
Brca1
Breast cancer type 1 susceptibility protein.
    
 0.664
ENSCCNP00000028016
annotation not available
    
 0.664
Uba52
Ubiquitin-60S ribosomal protein L40 isoform X1.
    
 0.613
ENSCCNP00000006766
annotation not available
    
  0.584
Fau
Ubiquitin-like protein fubi and ribosomal protein S30.
    
  0.584
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.