STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Coq6Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial. (472 aa)    
Predicted Functional Partners:
Coq5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial.
   
 0.982
Coq3
Polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase.
 
 
 0.961
Coq2
4-hydroxybenzoate polyprenyltransferase, mitochondrial.
  
  
 0.934
Coq4
Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial isoform X1.
 
 
 
 0.853
Kynu
Kynureninase isoform X1.
  
 
 0.853
Coq9
Ubiquinone biosynthesis protein COQ9, mitochondrial.
   
 
 0.852
Lss
Lanosterol synthase isoform X1.
   
 
 0.807
Coq7
5-demethoxyubiquinone hydroxylase, mitochondrial isoform X1.
   
 
 0.746
Pdss2
Decaprenyl-diphosphate synthase subunit 2.
   
 
 0.736
Hmgcr
3-hydroxy-3-methylglutaryl-Coenzyme A reductase.
   
  
 0.732
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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