STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gcc1GRIP and coiled-coil domain-containing protein 1. (770 aa)    
Predicted Functional Partners:
Bysl
Essential nuclear protein 1.
   
 0.948
Tsr1
Pre-rRNA-processing protein TSR1 homolog.
   
 0.935
Nob1
RNA-binding protein NOB1 isoform X1.
   
 0.934
Riok2
Serine/threonine-protein kinase RIO2 isoform X1.
   
 0.917
Ltv1
Protein LTV1 homolog.
   
 0.915
Imp3
U3 small nucleolar ribonucleoprotein protein IMP3.
   
 0.899
Aatf
Protein AATF isoform X1.
   
 
 0.894
Pwp2
PWP2 periodic tryptophan protein homolog (yeast).
   
 
 0.881
Heatr1
U3 small nucleolar RNA-associated protein 10.
   
 
 0.881
Krr1
KRR1 small subunit processome component homolog isoform X1.
   
 
 0.866
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.