STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smarcd1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1. (515 aa)    
Predicted Functional Partners:
Smarcb1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
   
 0.995
Smarce1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like.
   
 0.995
Smarca4
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4.
   
 0.995
Arid1a
LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A.
    
 0.995
Smarcc2
SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C.
    
 0.993
Actl6a
Actin-like protein 6A isoform X1.
   
 0.990
Arid2
AT-rich interactive domain-containing protein 2.
   
 0.980
Pbrm1
Protein polybromo-1 isoform X1.
    
 0.980
Phf10
PHD finger protein 10 isoform X1.
    
 0.979
Brd7
LOW QUALITY PROTEIN: bromodomain-containing protein 7.
   
 0.975
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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