STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Znf410Zinc finger protein 410 isoform X1. (478 aa)    
Predicted Functional Partners:
1810030O07Rik
Uncharacterized protein CXorf38 homolog isoform X1.
  
  0.423
Rpl18a
LOW QUALITY PROTEIN: 60S ribosomal protein L18a.
    
 
 0.423
Ep400
LOW QUALITY PROTEIN: E1A-binding protein p400.
   
 0.417
Tfcp2l1
Transcription factor CP2 and related proteins.
    
 0.417
Pecam1
Platelet endothelial cell adhesion molecule.
  
  
  0.415
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.