STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AlcamActivated leukocyte cell adhesion molecule. (583 aa)    
Predicted Functional Partners:
Cd6
LOW QUALITY PROTEIN: T-cell differentiation antigen CD6.
    
 0.986
L1cam
L1 cell adhesion molecule.
    
 0.710
Nt5e
5'-nucleotidase isoform X1.
   
  
 0.561
Eng
Endoglin isoform X1.
   
  
 0.553
Itgb1
Integrin beta-1 isoform X1.
     
 0.528
Thy1
Thy-1 membrane glycoprotein.
      
 0.525
Sdcbp2
Syntenin-1.
    
 0.504
Cntn6
Contactin-6 isoform X1.
    
 0.501
Cd44
CD44 antigen.
      
 0.491
Ttyh1
Protein tweety homolog 1 isoform X1.
      
 0.487
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.