STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000001777annotation not available (68 aa)    
Predicted Functional Partners:
ENSCCNP00000027490
Zinc transporter 9-like.
   
  
 0.582
ENSCCNP00000005111
annotation not available
      
 0.556
ENSCCNP00000021723
RING finger protein 26.
    
 
 0.536
Tmed1
Transmembrane emp24 domain-containing protein 1.
   
  
 0.502
Tmem43
Transmembrane protein 43.
      
 0.489
Zbtb2
Zinc finger and BTB domain-containing protein 2 isoform X1.
    
 
 0.453
Shisa3
Protein shisa-3 homolog.
      
 0.447
Sec13
Protein SEC13 homolog isoform X1.
      
 0.445
Rtn1
Reticulon-1 isoform X1.
   
 
 0.442
Endod1
Endonuclease domain-containing 1 protein.
    
 
 0.440
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.