STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nupl2Nucleoporin-like protein 2. (419 aa)    
Predicted Functional Partners:
Gle1
LOW QUALITY PROTEIN: nucleoporin GLE1.
   
 0.946
ENSCCNP00000011329
Nuclear RNA export factor 2-like.
    
 0.938
ENSCCNP00000011631
Nuclear RNA export factor 2-like.
    
 0.938
Nxf1
Nuclear RNA export factor 1.
    
 0.938
Xpo1
Exportin-1.
     
 0.927
Aaas
Aladin.
    
 0.848
Nup88
Nuclear pore complex protein Nup88 isoform X1.
     
 0.831
ENSCCNP00000026564
LOW QUALITY PROTEIN: nuclear pore complex protein Nup214-like.
   
 0.826
Rae1
MRNA export factor.
    
 0.811
Nup50
Nuclear pore complex protein Nup50 isoform X1.
     
 0.773
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.