STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GpnmbTransmembrane glycoprotein NMB. (559 aa)    
Predicted Functional Partners:
Egfr
Epidermal growth factor receptor isoform X1.
    
 0.809
Aoc1
Amiloride-sensitive amine oxidase [copper-containing].
      
 0.761
Tmem176a
LOW QUALITY PROTEIN: transmembrane protein 176A.
      
 0.718
Ptk6
Protein tyrosine kinase 6.
   
 0.706
Kcnh2
Potassium voltage-gated channel Eag-related subfamily H member 2.
      
 0.686
Kcns1
Potassium voltage-gated channel delayed-rectifier subfamily S member 1.
      
 0.630
Hbegf
LOW QUALITY PROTEIN: proheparin-binding EGF-like growth factor.
     
 0.621
Zdhhc3
Zinc finger, DHHC domain containing 3.
      
 0.615
Bpifb4
BPI fold containing family B, member 4.
   
  
 0.581
Aldh18a1
Delta-1-pyrroline-5-carboxylate synthetase.
   
  
 0.570
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.