STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prdm1PR domain zinc finger protein 1 isoform X1. (838 aa)    
Predicted Functional Partners:
Ehmt2
Histone-lysine N-methyltransferase EHMT2 isoform X1.
    
 0.690
Stat3
Signal transducer and activator of transcription 3 isoform X1.
   
 
 0.621
Irf4
Interferon regulatory factor 4.
   
 
 0.601
Hdac1
Histone deacetylase 1/2.
    
 0.592
Xbp1
LOW QUALITY PROTEIN: X-box-binding protein 1.
   
  
 0.589
Ciz1
Cip1-interacting zinc finger protein isoform X1.
   
 
 0.588
Pax5
Paired box protein Pax-5 isoform X1.
      
 0.569
Reck
Reversion-inducing cysteine-rich protein with Kazal motifs.
      
 0.525
ENSCCNP00000018580
annotation not available
   
 
 0.505
Ehmt1
LOW QUALITY PROTEIN: histone-lysine N-methyltransferase EHMT1.
    
 0.492
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.