STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psma1Proteasome subunit alpha type-1. (263 aa)    
Predicted Functional Partners:
Psma6
Proteasome (prosome, macropain) subunit, alpha type 6.
   
0.999
Psmd14
26S proteasome non-ATPase regulatory subunit 14.
   
 0.999
Psmd4
LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 4.
   
 0.999
Psmb4
Proteasome subunit beta type-4.
   
 0.999
Psma5
Proteasome subunit alpha type-5.
   
0.999
Psmb2
Proteasome subunit beta type-2.
   
 0.999
Psma3
Proteasome subunit alpha type-3 isoform X1.
  
0.999
Psma4
Proteasome subunit alpha type-4.
   
0.999
Psmb1
Proteasome subunit beta type-1.
   
 0.999
ENSCCNP00000000229
26S proteasome regulatory subunit T1.
   
 0.998
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.