STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnpla4Patatin-like phospholipase domain-containing protein 4. (253 aa)    
Predicted Functional Partners:
Rdh11
Retinol dehydrogenase 11.
   
 
 0.918
Rdh12
Retinol dehydrogenase 12 isoform X1.
   
 
 0.918
Rpe65
Retinoid isomerohydrolase / lutein isomerase.
     
 0.913
Sdr16c5
All-trans-retinol dehydrogenase (NAD+).
     
 0.905
Dhrs3
Short-chain dehydrogenase/reductase 3.
     
 0.905
Rdh10
Retinol dehydrogenase 10.
     
 0.905
ENSCCNP00000005720
Dehydrogenase/reductase SDR family member 4-like.
   
 
 0.903
Retsat
All-trans-retinol 13,14-reductase.
     
 0.902
Cyp26a1
Cytochrome P450 family 26 subfamily A.
   
 
 0.902
ENSCCNP00000020181
Retinol dehydrogenase 2-like.
     
 0.901
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.