STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Wdr12Ribosome biogenesis protein WDR12. (423 aa)    
Predicted Functional Partners:
Bop1
Ribosome biogenesis protein BOP1.
   
 0.999
Pes1
Pescadillo homolog isoform X1.
   
 0.999
Ddx18
ATP-dependent RNA helicase DDX18 isoform X1.
   
 0.995
ENSCCNP00000028145
annotation not available
   
 
 0.995
Nifk
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 
 0.995
Brix1
Ribosome biogenesis protein BRX1 homolog.
   
 
 0.994
Ebna1bp2
Probable rRNA-processing protein EBP2.
   
 0.994
ENSCCNP00000031473
annotation not available
   
 
 0.994
Nip7
60S ribosome subunit biogenesis protein NIP7 homolog.
   
 
 0.992
Wdr74
Ribosome biogenesis protein NSA1.
   
 
 0.991
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.