STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc142Coiled-coil domain-containing protein 142. (616 aa)    
Predicted Functional Partners:
Eif4a2
Eukaryotic initiation factor 4A-II isoform X1.
   
 0.583
ENSCCNP00000006346
annotation not available
   
 0.583
Eif4a1
Eukaryotic initiation factor 4A-I.
   
 0.583
ENSCCNP00000027102
annotation not available
   
 0.583
ENSCCNP00000027986
annotation not available
   
 0.583
Btrc
F-box/WD repeat-containing protein 1A isoform X1.
    
 
 0.529
Cldn18
Claudin-18 isoform X1.
      
 0.493
Pdcd7
Programmed cell death protein 7.
      
 0.470
Reck
Reversion-inducing cysteine-rich protein with Kazal motifs.
      
 0.469
Thbs1
Thrombospondin 1.
     
 0.465
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.