STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GabrdLOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit delta. (448 aa)    
Predicted Functional Partners:
Trak2
Trafficking kinesin-binding protein 2.
    
 0.921
Plcl1
Inactive phospholipase C-like protein 1.
     
 0.902
Nsf
Vesicle-fusing ATPase isoform X1.
   
 
 0.902
Gabarap
Gamma-aminobutyric acid receptor-associated protein.
     
 0.901
Gabarapl2
Gamma-aminobutyric acid receptor-associated protein-like 2.
     
 0.901
Gabarapl1
Gamma-aminobutyric acid receptor-associated protein-like 1.
     
 0.901
Gabra4
Gamma-aminobutyric acid receptor subunit alpha-4 isoform X1.
  
0.862
Gabra6
Gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6.
  
0.708
Slc6a1
Solute carrier family 6 (neurotransmitter transporter, GABA) member 1.
   
  
 0.618
Gabra1
Gamma-aminobutyric acid receptor subunit alpha-1.
  
0.592
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.