STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc4a1apLOW QUALITY PROTEIN: kanadaptin. (741 aa)    
Predicted Functional Partners:
Osgep
Probable tRNA N6-adenosine threonylcarbamoyltransferase.
      
 0.591
Prpf38a
Pre-mRNA-splicing factor 38A isoform X1.
   
  
 0.449
Dido1
Death-inducer obliterator 1.
      
 0.445
ENSCCNP00000032370
annotation not available
   
   0.429
Pin1
Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1.
      
 0.412
Slc4a1
Solute carrier family 4 (anion exchanger), member 1.
    
 
 0.409
Nol7
Nucleolar protein 7 isoform X1.
      
 0.405
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.