STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lamb2Laminin subunit beta-2. (1797 aa)    
Predicted Functional Partners:
Itgav
LOW QUALITY PROTEIN: integrin alpha-V.
    
 0.933
Itga6
LOW QUALITY PROTEIN: integrin alpha-6.
    
 0.932
Itga7
LOW QUALITY PROTEIN: integrin alpha-7.
    
 0.932
Dag1
Dystroglycan 1.
    
 0.931
Itga2
Integrin alpha 2.
    
 0.929
Itga3
Integrin alpha-3 isoform X1.
    
 0.926
Itga1
Integrin alpha-1 isoform X1.
    
 0.924
Itgb1
Integrin beta-1 isoform X1.
   
 0.923
Itgb4
Integrin beta-4 isoform X1.
    
 0.923
Lama2
LOW QUALITY PROTEIN: laminin subunit alpha-2.
   
0.920
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.