STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FechProtoporphyrin/coproporphyrin ferrochelatase. (433 aa)    
Predicted Functional Partners:
Ppox
Protoporphyrinogen oxidase.
  
 
 0.988
Fxn
Frataxin, mitochondrial.
    
 0.984
Urod
Uroporphyrinogen decarboxylase.
 
  
 0.958
Hmox1
Heme oxygenase 1.
    
 0.952
Hmox2
Heme oxygenase 2 isoform X1.
    
 0.952
Heph
Hephaestin.
   
 
 0.938
Cp
Ceruloplasmin.
   
 
 0.934
ENSCCNP00000031469
LOW QUALITY PROTEIN: cytochrome c-type heme lyase.
     
 0.923
Endov
Endonuclease V.
  
  
 0.915
N6amt1
HemK methyltransferase family member 2 isoform X1.
    
 0.835
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.