STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)    
Predicted Functional Partners:
Leo1
RNA polymerase-associated protein LEO1 isoform X1.
   
  0.987
Polr2l
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
 0.979
Polr2f
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.970
Polr2j
DNA-directed RNA polymerase II subunit RPB11-a.
   
 0.970
Polr2e
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 0.967
Polr3h
DNA-directed RNA polymerase III subunit RPC8 isoform X1.
   
 0.966
Polr2h
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
   
 0.965
Polr2i
DNA-directed RNA polymerase II subunit RPB9 isoform X1.
   
 0.962
Polr1c
DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1.
   
 0.961
Polr1d
DNA-directed RNA polymerases I and III subunit RPAC2.
   
 0.961
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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