STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PolqLOW QUALITY PROTEIN: DNA polymerase theta. (2589 aa)    
Predicted Functional Partners:
Fancm
LOW QUALITY PROTEIN: Fanconi anemia group M protein.
   
 
 0.820
Fancd2
LOW QUALITY PROTEIN: Fanconi anemia group D2 protein.
   
 0.706
ENSCCNP00000030561
Bloom syndrome protein-like.
  
  
 0.704
Fen1
Flap endonuclease 1.
  
 
 0.691
Exo1
Exonuclease 1.
  
 
 0.678
Neil3
Endonuclease 8-like 3 isoform X1.
  
  
 0.675
Mre11a
Double-strand break repair protein MRE11A isoform X1.
   
 0.662
Faap20
Fanconi anemia core complex-associated protein 20.
     
 0.646
Fan1
LOW QUALITY PROTEIN: fanconi-associated nuclease 1.
   
 
 0.641
Fanci
Fanconi anemia group I protein isoform X1.
   
 0.612
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.