STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bet1lBET1-like protein isoform X1. (111 aa)    
Predicted Functional Partners:
Stx5
Syntaxin 5.
   
 0.999
ENSCCNP00000023348
Golgi SNAP receptor complex member 2-like isoform X1.
   
 0.994
Gosr1
LOW QUALITY PROTEIN: Golgi SNAP receptor complex member 1.
    
 0.988
Ykt6
Synaptobrevin homolog YKT6.
    
 0.988
Uso1
General vesicular transport factor p115 isoform X1.
    
 0.978
Sec22b
Vesicle-trafficking protein SEC22b.
   
 0.977
Bet1
Blocked early in transport 1.
     
 
0.935
Scfd1
Sec1 family domain-containing protein 1 isoform X1.
   
 0.916
ENSCCNP00000033501
annotation not available
   
 0.834
ENSCCNP00000022663
annotation not available
   
 0.775
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.