ENSCCNP00000004655 protein (Castor canadensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ENSCCNP00000004655

annotation not available (206 aa)

Predicted Functional Partners:

Hnrnpm

0.717

ENSCCNP00000002978

0.639

Tardbp

0.639

Ybx1

0.583

Tbp

0.570

Srsf3

0.569

ENSCCNP00000014674

0.565

Hnrnpa2b1

0.565

Dhx9

0.558

Hnrnpl

0.556

Your Current Organism:

Castor canadensis

NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dhx9	ENSCCNP00000002978	ENSCCNP00000013164	ENSCCNP00000002978	ATP-dependent RNA helicase A.	LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like.	0.512
Dhx9	ENSCCNP00000004655	ENSCCNP00000013164	ENSCCNP00000004655	ATP-dependent RNA helicase A.	annotation not available	0.558
Dhx9	ENSCCNP00000014674	ENSCCNP00000013164	ENSCCNP00000014674	ATP-dependent RNA helicase A.	annotation not available	0.558
Dhx9	Hnrnpa2b1	ENSCCNP00000013164	ENSCCNP00000021388	ATP-dependent RNA helicase A.	Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.	0.594
Dhx9	Hnrnpl	ENSCCNP00000013164	ENSCCNP00000027305	ATP-dependent RNA helicase A.	Heterogeneous nuclear ribonucleoprotein L.	0.624
Dhx9	Hnrnpm	ENSCCNP00000013164	ENSCCNP00000023020	ATP-dependent RNA helicase A.	Heterogeneous nuclear ribonucleoprotein M.	0.805
Dhx9	Srsf3	ENSCCNP00000013164	ENSCCNP00000021178	ATP-dependent RNA helicase A.	Splicing factor, arginine/serine-rich 3.	0.631
Dhx9	Tardbp	ENSCCNP00000013164	ENSCCNP00000030822	ATP-dependent RNA helicase A.	LOW QUALITY PROTEIN: TAR DNA-binding protein 43.	0.512
Dhx9	Ybx1	ENSCCNP00000013164	ENSCCNP00000013411	ATP-dependent RNA helicase A.	Nuclease-sensitive element-binding protein 1.	0.659
ENSCCNP00000002978	Dhx9	ENSCCNP00000002978	ENSCCNP00000013164	LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like.	ATP-dependent RNA helicase A.	0.512
ENSCCNP00000002978	ENSCCNP00000004655	ENSCCNP00000002978	ENSCCNP00000004655	LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like.	annotation not available	0.639
ENSCCNP00000002978	ENSCCNP00000014674	ENSCCNP00000002978	ENSCCNP00000014674	LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like.	annotation not available	0.624
ENSCCNP00000002978	Hnrnpa2b1	ENSCCNP00000002978	ENSCCNP00000021388	LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like.	Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1.	0.661
ENSCCNP00000002978	Hnrnpl	ENSCCNP00000002978	ENSCCNP00000027305	LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like.	Heterogeneous nuclear ribonucleoprotein L.	0.511
ENSCCNP00000002978	Hnrnpm	ENSCCNP00000002978	ENSCCNP00000023020	LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like.	Heterogeneous nuclear ribonucleoprotein M.	0.700
ENSCCNP00000002978	Srsf3	ENSCCNP00000002978	ENSCCNP00000021178	LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like.	Splicing factor, arginine/serine-rich 3.	0.656
ENSCCNP00000002978	Tardbp	ENSCCNP00000002978	ENSCCNP00000030822	LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like.	LOW QUALITY PROTEIN: TAR DNA-binding protein 43.	0.901
ENSCCNP00000004655	Dhx9	ENSCCNP00000004655	ENSCCNP00000013164	annotation not available	ATP-dependent RNA helicase A.	0.558
ENSCCNP00000004655	ENSCCNP00000002978	ENSCCNP00000004655	ENSCCNP00000002978	annotation not available	LOW QUALITY PROTEIN: TAR DNA-binding protein 43-like.	0.639
ENSCCNP00000004655	ENSCCNP00000014674	ENSCCNP00000004655	ENSCCNP00000014674	annotation not available	annotation not available	0.565