STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fhod3FH1/FH2 domain-containing protein 3 isoform X1. (1201 aa)    
Predicted Functional Partners:
ENSCCNP00000005445
annotation not available
      
 0.483
ENSCCNP00000004746
annotation not available
    
 
 0.450
ENSCCNP00000004871
LOW QUALITY PROTEIN: nesprin-1-like.
    
 
 0.450
ENSCCNP00000005345
LOW QUALITY PROTEIN: nesprin-1-like.
    
 
 0.450
Pfn4
Profilin-4.
    
 
 0.414
Cd47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
      
 0.402
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.