STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccdc146Coiled-coil domain-containing protein 146. (329 aa)    
Predicted Functional Partners:
ENSCCNP00000006863
annotation not available
 
      0.900
Fancm
LOW QUALITY PROTEIN: Fanconi anemia group M protein.
    
 0.801
Cfap52
Cilia- and flagella-associated protein 52.
   
 0.472
Cfap161
LOW QUALITY PROTEIN: cilia- and flagella-associated protein 161.
   
 0.456
Rsph14
Radial spoke head homolog 14 (Chlamydomonas).
      
 0.454
Ccdc113
LOW QUALITY PROTEIN: coiled-coil domain-containing protein 113.
  
  
 0.446
Dlec1
LOW QUALITY PROTEIN: deleted in lung and esophageal cancer protein 1.
    
 0.445
Lrrc23
Leucine-rich repeat-containing protein 23.
   
 0.424
Lrrc34
Leucine-rich repeat-containing protein 34.
      
 0.408
Spata18
Mitochondria-eating protein isoform X1.
      
 0.407
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.