STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000004840LOW QUALITY PROTEIN: cytochrome c oxidase assembly factor 6 homolog. (73 aa)    
Predicted Functional Partners:
Cox5a
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.944
ENSCCNP00000022513
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.943
ENSCCNP00000030211
Ubiquinol-cytochrome c reductase subunit 8.
   
 0.919
Uqcr10
Ubiquinol-cytochrome c reductase subunit 9.
   
 0.912
ENSCCNP00000002486
Ubiquinol-cytochrome c reductase subunit 7.
   
 0.864
ENSCCNP00000007408
annotation not available
   
 0.864
ENSCCNP00000009227
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
   
 0.859
ENSCCNP00000029239
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 0.859
Cox6a2
Cytochrome c oxidase subunit 6A2, mitochondrial.
   
 0.844
Cox6a1
Cytochrome c oxidase subunit 6A1, mitochondrial.
   
 0.844
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.