STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pknox2Pbx/knotted 1 homeobox 2. (299 aa)    
Predicted Functional Partners:
Hoxb1
Homeobox protein HoxA/B/D1.
   
 0.632
ENSCCNP00000017138
annotation not available
  
 
0.586
Hyls1
Hydrolethalus syndrome protein 1.
      
 0.567
Pbx2
Pre-B-cell leukemia transcription factor 2.
    
0.542
ENSCCNP00000017144
annotation not available
    
 0.542
ENSCCNP00000017154
annotation not available
    
 0.542
ENSCCNP00000017161
Pre-B-cell leukemia transcription factor 3.
    
 0.542
Rfx4
Transcription factor RFX4 isoform X1.
      
 0.489
Pecr
Peroxisomal trans-2-enoyl-CoA reductase isoform X1.
   
 
 0.479
Smad4
Mothers against decapentaplegic homolog 4 isoform X1.
    
 0.461
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.