ENSCCNP00000005194 protein (Castor canadensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCCNP00000005194

annotation not available (2201 aa)

Predicted Functional Partners:

ENSCCNP00000005015

0.841

ENSCCNP00000016635

0.810

Arid4b

0.594

Arid4a

0.588

Fancm

0.575

Polr2c

0.554

Supt16h

0.552

Treh-2

0.539

Actr5

0.526

Ctnnb1

0.515

Your Current Organism:

Castor canadensis

NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Actr5	ENSCCNP00000005015	ENSCCNP00000027096	ENSCCNP00000005015	LOW QUALITY PROTEIN: actin-related protein 5.	annotation not available	0.526
Actr5	ENSCCNP00000005194	ENSCCNP00000027096	ENSCCNP00000005194	LOW QUALITY PROTEIN: actin-related protein 5.	annotation not available	0.526
Actr5	ENSCCNP00000016635	ENSCCNP00000027096	ENSCCNP00000016635	LOW QUALITY PROTEIN: actin-related protein 5.	annotation not available	0.526
Arid4a	Arid4b	ENSCCNP00000028768	ENSCCNP00000012660	AT-rich interactive domain-containing protein 4A isoform X1.	AT-rich interactive domain-containing protein 4B isoform X1.	0.800
Arid4a	ENSCCNP00000005015	ENSCCNP00000028768	ENSCCNP00000005015	AT-rich interactive domain-containing protein 4A isoform X1.	annotation not available	0.588
Arid4a	ENSCCNP00000005194	ENSCCNP00000028768	ENSCCNP00000005194	AT-rich interactive domain-containing protein 4A isoform X1.	annotation not available	0.588
Arid4a	ENSCCNP00000016635	ENSCCNP00000028768	ENSCCNP00000016635	AT-rich interactive domain-containing protein 4A isoform X1.	annotation not available	0.601
Arid4b	Arid4a	ENSCCNP00000012660	ENSCCNP00000028768	AT-rich interactive domain-containing protein 4B isoform X1.	AT-rich interactive domain-containing protein 4A isoform X1.	0.800
Arid4b	ENSCCNP00000005015	ENSCCNP00000012660	ENSCCNP00000005015	AT-rich interactive domain-containing protein 4B isoform X1.	annotation not available	0.594
Arid4b	ENSCCNP00000005194	ENSCCNP00000012660	ENSCCNP00000005194	AT-rich interactive domain-containing protein 4B isoform X1.	annotation not available	0.594
Arid4b	ENSCCNP00000016635	ENSCCNP00000012660	ENSCCNP00000016635	AT-rich interactive domain-containing protein 4B isoform X1.	annotation not available	0.623
Ctnnb1	ENSCCNP00000005015	ENSCCNP00000002625	ENSCCNP00000005015	Catenin beta 1.	annotation not available	0.515
Ctnnb1	ENSCCNP00000005194	ENSCCNP00000002625	ENSCCNP00000005194	Catenin beta 1.	annotation not available	0.515
Ctnnb1	ENSCCNP00000016635	ENSCCNP00000002625	ENSCCNP00000016635	Catenin beta 1.	annotation not available	0.515
ENSCCNP00000005015	Actr5	ENSCCNP00000005015	ENSCCNP00000027096	annotation not available	LOW QUALITY PROTEIN: actin-related protein 5.	0.526
ENSCCNP00000005015	Arid4a	ENSCCNP00000005015	ENSCCNP00000028768	annotation not available	AT-rich interactive domain-containing protein 4A isoform X1.	0.588
ENSCCNP00000005015	Arid4b	ENSCCNP00000005015	ENSCCNP00000012660	annotation not available	AT-rich interactive domain-containing protein 4B isoform X1.	0.594
ENSCCNP00000005015	Ctnnb1	ENSCCNP00000005015	ENSCCNP00000002625	annotation not available	Catenin beta 1.	0.515
ENSCCNP00000005015	ENSCCNP00000005194	ENSCCNP00000005015	ENSCCNP00000005194	annotation not available	annotation not available	0.841
ENSCCNP00000005015	ENSCCNP00000016635	ENSCCNP00000005015	ENSCCNP00000016635	annotation not available	annotation not available	0.919