STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ApmapAdipocyte plasma membrane-associated protein. (415 aa)    
Predicted Functional Partners:
Fdxacb1
LOW QUALITY PROTEIN: ferredoxin-fold anticodon-binding domain-containing protein 1.
  
  
 0.955
Exosc10
Exosome complex exonuclease RRP6.
   
 
 0.931
Eif5b
Eukaryotic translation initiation factor 5B isoform X1.
  
  
 0.928
Mtif2
Translation initiation factor IF-2, mitochondrial isoform X1.
  
  
 0.928
Pdcd11
Protein RRP5 homolog isoform X1.
  
  
 0.925
Mrpl17
LOW QUALITY PROTEIN: 39S ribosomal protein L17, mitochondrial.
  
  
 0.911
ENSCCNP00000025295
CTP synthase 2-like isoform X1.
  
  
 0.911
Ttc5
Tetratricopeptide repeat protein 5 isoform X1.
  
  
 0.911
Mrpl20
39S ribosomal protein L20, mitochondrial.
  
  
 0.906
Trnt1
CCA tRNA nucleotidyltransferase 1, mitochondrial.
  
 0.902
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.