STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Carmil3LOW QUALITY PROTEIN: capping protein, Arp2/3 and myosin-I linker protein 3. (1372 aa)    
Predicted Functional Partners:
ENSCCNP00000019068
annotation not available
    
 0.654
Msl2
E3 ubiquitin-protein ligase MSL2.
    
 0.555
Tmem145
Transmembrane protein 145.
      
 0.454
Srgap3
LOW QUALITY PROTEIN: SLIT-ROBO Rho GTPase-activating protein 3.
    
 0.434
Kat7
Histone acetyltransferase KAT7 isoform X1.
    
 0.413
Kat6a
Histone acetyltransferase KAT6A.
    
 0.413
Kat5
Histone acetyltransferase KAT5 isoform X1.
    
 0.413
Kat8
Histone acetyltransferase KAT8 isoform X1.
    
 0.413
Kat6b
K(lysine) acetyltransferase 6B.
    
 0.413
Rundc3a
RUN domain-containing protein 3A isoform X1.
   
 
 0.411
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.