STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdh9Cadherin 9, type 2, T1-cadherin. (789 aa)    
Predicted Functional Partners:
Jup
Junction plakoglobin isoform X1.
    
 0.582
Ctnnb1
Catenin beta 1.
    
 0.570
Ctnnd1
Catenin (cadherin-associated protein), delta 1.
   
 0.529
Arvcf
Armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1.
   
 0.529
Cdh18
Cadherin-18 isoform X1.
  
0.476
Kcnb2
Potassium voltage-gated channel Shab-related subfamily B member 2.
   
 
 0.466
Cdh13
Cadherin 13, H-cadherin.
     
0.463
ENSCCNP00000011903
Cadherin-8-like.
     
0.453
Cdh7
Cadherin-7 isoform X1.
     
0.438
Tas2r119
Taste receptor type 2 member 1.
      
 0.436
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.