STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoxb6Homeobox protein HoxA/B/C6. (224 aa)    
Predicted Functional Partners:
Hoxb7
Homeobox protein HoxA/B7.
  
 
0.972
Hoxb5
Homeobox protein HoxA/B/C5.
   
 
0.924
Hoxc4
Homeobox protein HoxA/B/C/D4.
  
 
0.874
Hoxb8
Homeobox protein HoxB/C/D8.
   
 
0.854
Hoxc9
Homeobox protein HoxB/C/D9.
   
 
0.695
Hoxb9
Homeobox protein HoxB/C/D9.
   
 
0.673
Hoxa7
Homeobox protein HoxA/B7.
  
  
0.668
Hoxb4
Homeobox protein HoxA/B/C/D4.
   
 
0.664
Hoxc6
Homeobox protein HoxA/B/C6.
   
  
0.650
Pbx2
Pre-B-cell leukemia transcription factor 2.
    
 0.648
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.