STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dmrt1Doublesex- and mab-3-related transcription factor 1. (355 aa)    
Predicted Functional Partners:
Sox9
Transcription factor SOX9 (SOX group E).
    
 0.726
Sox8
Transcription factor SOX7/8/10/18 (SOX group E/F).
    
 0.720
Tnp1
Spermatid nuclear transition protein 1.
      
 0.703
Amh
Muellerian-inhibiting factor.
      
 0.688
Sox30
Transcription factor SOX-30 isoform X1.
    
 0.672
Gata4
Transcription factor GATA-4.
   
 
 0.647
Sox6
Transcription factor SOX5/6/13 (SOX group D).
    
 
 0.605
Kptn
KICSTOR complex protein kaptin.
    
 0.596
Tulp2
Tubby-like protein 2.
      
 0.594
Szt2
KICSTOR complex protein SZT2.
    
 0.592
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.